Study Information

Last updated: May 22, 2020
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This site is a data portal to help scientists, researchers, and clinicians mine the human gene expression changes that occur in response to SARS-CoV-2 infection, the pathogenic agent of COVID-19, as well as to provide resources for use of RNA-seq data from clinical cohorts. These data are from the first batch of 735 patient samples (n=216 COVID-19 positive and 519 COVID-19 negative by RT-PCR) described in more detail in our paper here.

Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions

This work is generously supported by Citadel, WorldQuant, the Vallee Foundation, the National Center for Advancing Translational Sciences of the National Institutes of Health (UL1TR000457), the Core Facilities at Weill Cornell Medicine, the Scientific Computing Unit (SCU) of the ICB, XSEDE Supercomputing Resources, and the National Science Foundation (1840275).

You can download the pre-print version of Supplementary Table 3 & 4 from here. Results are subject to change.

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